Publications

Under Review & Preparation:

9. Anthea Lee, Chen Chen and Hui-Yuan Yeh. Health and Dietary Patterns in Populations from Taiwan and Neighboring Regions 2000 Years Ago. (in preparation)

8. Chen Chen, Anthea Lee and Hui-Yuan Yeh. Health and Diet in Han Dynasty Populations from Shandong and Neighboring Regions. (in preparation)

7. Hui-Yuan Yeh, Chen Chen, Anthea Lee. Night Soil Fertilisation and Parasitic Infections: A Preliminary Study of Agricultural Practices, Economic Factors, and Disease Ecology in the Song Dynasty. Parasitology. (submitted)

6. Zhan Xiaoya, Yeh Huiyuan, and Wen Shaoqing. A Review of Parasitological Archaeology Research in China and Abroad. (in preparation)

5. Xiaoya ZHAN, Yingpei ZHU, Jing SHAO, Hui-Yuan YEH, Shaoqing WEN. A possible case of juvenile ankylosing spondylitis in Central Plains of Ming-Qing China. (in preparation)

4. Chao, Ling-Ya, Richard Chuang, and Hui-Yuan Yeh^. “Archaeoparasitological Analysis of Dahu Culture Population: A Case Study of the Wushantou Site.” (in preparation)

3. Yapp, Edward K. Y.^, Ming Wei, Chen Chen, and Hui-Yuan Yeh^, Xiangfeng Wang, and Yonggang Wen. 2025. Blue-and-white porcelain image dataset: dynastic classification, its visual explanation and museum–feature visualisation. Scientific Reports. (submitted)

2. Dautartas, Angela M.^, Jenna M. Dittmar, Jennifer Austen, Nathan Welch, Yaohan Wu, Yuanyuan Selina Shen, Ashley Schults, Hui Wang, Guoke Chen, Ruilin Mao, Hui-Yuan Yeh, and Elizabeth S. Berger. Estimation of sex using discriminant function analysis for Bronze Age populations from Northwest China. International Journal of Osteoarchaeology. (submitted)

1. Zhou, Yawei, Lei Zhou, Xiaoya Zhan, Wai Yee Poon, Chen Chen and Hui-Yuan Yeh^. Study on fractures of horseback rider in Northern Wei Dynasty at Datong Trade City Site. International Journal of Osteoarchaeology. (submitted)

Book in Progress:

2. Monograph: A Prehistory of Taiwan: Population Change from the Paleolithic to the Metal Age (under contract with Amsterdam University Press)

1. Monograph: Paleolithic Age to the 17th Century along the Eastern Coastline of Taiwan (under contract with Springer)

Journal Papers:

66. Wang, Hui, Elizabeth Berger, Hui-Yuan Yeh, and Shaoqing Wen. 2023. “History of Diseases and Population Health along the Silk Road in Ancient China.” Cultural Relics in Southern China 1:281–287.

65. Zhan, Xiaoya*^, Mi Zhou, Qun Zhang, and Hui-Yuan Yeh^. 2024. “Intestinal Parasites from Hubei Archaeological Sites of Early China (5th Century BCE to 3rd Century CE).” Journal of Archaeological Science: Reports 58:104734. https://doi.org/10.1016/j.jasrep.2024.104734. (Impact Factor: 1.5)

64. He, Guanglin^§, Hui-Yuan Yeh^§, and Mengge Wang^§. 2024. “Genetic Insights into Ethnolinguistic Diversity in Southwestern China.” Frontiers in Genetics 15:1432509. https://doi.org/10.3389/fgene.2024.1432509. (Impact Factor: 2.8)

63. Monroe, Shannon^, Jenna M. Dittmar, Elizabeth Berger, Angela Dautartas, Ruilin Mao, Hui Wang, and Hui-Yuan Yeh. 2024. “Oral Health and Non-Molar Dental Attrition in the Siwa-period Individuals from the Bronze Age Mogou Cemetery, Northwest China.” International Journal of Osteoarchaeology 34(2): e3286. https://doi.org/10.1002/oa.3286. (Impact Factor: 1.3)

62. Yeh, Hui-Yuan^, and Qun Zhang. 2024. “Earliest Realistic Therapeutic Scene in Ancient Chinese Paintings.” Journal of Clinical Chinese Medicine 30(1): 15-29. https://doi.org/10.6968/TJCCM.202401_30(1).0002.

61. Fu, Jiayu, Xiaoya Zhan*, Zhen Wang, Yaopeng Qian, Hui-Yuan Yeh, and Liang Chen^. 2023. “Influence of Living Environments on Maxillary Sinusitis for the Loess Plateau Residents During Shang and Western Zhou.” Quaternary Sciences 43(5): 1460-70. https://doi.10.11928/j.issn.1001-7410.2023.05.23.

60. Zhan, Xiaoya*, Jing Shao, Yingpei Zhu, and Hui-Yuan Yeh^. 2023. “A Case of Septic Arthritis of the Hip in Central Plains, China, during the Western Han Dynasty (3rd Century BCE–1st Century CE).” International Journal of Paleopathology 40: 87–92. https://doi.org/10.1016/j.ijpp.2022.12.007. (Impact Factor: 1.25)

59. He, Guanglin§^, Zhi-Quan Fan§, Xing Zou, Xiaohui Deng, Hui-Yuan Yeh, Zheng Wang, Jing Liu, Quyi Xu, Ling Chen, Xiao-Hua Deng, Chuan-Chao Wang^, Changhui Liu^, Mengge Wang§^, and Chao Liu^. 2023. “Demographic Model and Biological Adaptation Inferred from the Genome-Wide SNP Data Reveal Tripartite Origins of Southernmost Chinese Huis.” American Journal of Biological Anthropology 180(3): 488–05. https://doi.org/10.1002/ajpa.24672. (Impact Factor: 2.868)

58. He, Guang‐Lin§^, Ying‐Xiang Li§, Xing Zou§, Hui‐Yuan Yeh, Ren‐Kuan Tang, Pei‐Xin Wang, Jing‐Ya Bai, Xiao‐Min Yang, Zheng Wang, Jian‐Xin Guo, Jin‐Wen Chen, Jing Chen, Mei‐Qing Yang, Jing Zhao, Jin Sun, Kong‐Yang Zhu, Hao Ma, Rui Wang, Wen‐Jiao Yang, Rong Hu, Lan‐Hai Wei, Yi‐Ping Hou, Meng‐Ge Wang^, Gang Chen^, and Chuan‐Chao Wang^. 2023. “Northern Gene Flow into Southeastern East Asians Inferred from Genome-Wide Array Genotyping.” Journal of Systematics and Evolution 61(1): 179-197. https://doi.org/10.1111/jse.12826. (Impact Factor: 4.33)

57. He, Guanglin§^, Mengge Wang§, Xing Zou, Hui-Yuan Yeh, Changhui Liu, Chao Liu^, Gang Chen^, and Chuan-Chao Wang^. 2023. “Extensive Ethnolinguistic Diversity at the Crossroads of North China and South Siberia Reflects Multiple Sources of Genetic Diversity.” Journal of Systematics and Evolution 61(1): 230–50. https://doi.org/10.1111/jse.12827.  (Impact Factor: 4.330)

56. Wang, Mengge§, Guanglin He§^, Xing Zou§, Pengyu Chen, Zheng Wang, Renkuan Tang, Xiaomin Yang, Jing Chen, Meiqing Yang, Yingxiang Li, Jing Liu, Fei Wang, Jing Zhao, Jianxin Guo, Rong Hu, Lan-Hai Wei, Gang Chen, Hui-Yuan Yeh^, and Chuan-Chao Wang^. 2022. “Reconstructing the Genetic Admixture History of Tai-Kadai and Sinitic People: Insights from Genome-Wide SNP Data from South China.” Journal of Systematics and Evolution 61(1): 157–78. https://doi.org/10.1111/jse.12825.  (Impact Factor: 4.330)

55. Guanglin He§^, Atif Adnan§^, Mengge Wang§, Wedad Saeed Al-Qahtani, Fatmah Ahmed Safhi, Hui-Yuan Yeh, Sibte Hadi, Chuan-Chao Wang^, Chao Liu^, Jun Yao^. Genetic admixture history and forensic characteristics of Tibeto-Burman-speaking Qiang people explored via the newly developed Y-STR panel and genome-wide SNP data. 2022. Frontiers in Ecology and Evolution 10:939659. https://doi.org/10.3389/fevo.2022.939659. (Impact Factor 2.4)

54. Liu, Yan§, Jie Xie§, Mengge Wang§^, Changhui Liu, Jingrong Zhu, Xing Zou, Wenshan Li, Lin Wang, Cuo Leng, Quyi Xu, Hui-Yuan Yeh^, Chuan-Chao Wang^, Xiaohong Wen^, Chao Liu^, and Guanglin He§^. 2022. “Genomic Insights into the Population History and Biological Adaptation of Southwestern Chinese Hmong-Mien People.” Frontiers in Genetics 12: 815160. https://doi.org/10.3389/fgene.2021.815160.  (Impact Factor: 3.789)

53. Zheng, Xuhui, Xiaoya Zhan*, Yan Ding, Yanfeng Li, Hui-Yuan Yeh, and Liang Chen^. 2022. “A Case of Well-Healed Foot Amputation in Early China (8th-5th Centuries BCE).” International Journal of Osteoarchaeology 32(1): 132–41. https://doi.org/10.1002/oa.3050.  (Impact Factor: 1.311)

52. Tng, Sian Soo, Nguyen Quoc Khanh Le^, Hui-Yuan Yeh, and Matthew Chin Heng Chua^. 2022. “Improved Prediction Model of Protein Lysine Crotonylation Sites Using Bidirectional Recurrent Neural Networks.” Journal of Proteome Research 21(1): 265–73. https://doi.org/10.1021/acs.jproteome.1c00848. (Impact Factor 4.466)

51. Zhou, Yawei, Yiping Lu, Jianing He, Ziyi Li, Xiangyu Zhang, Qun Zhang**^, and Hui-Yuan Yeh^. 2022. “Bioarchaeological Insights into Disability: Skeletal Dysplasia from the Iron Age Northern China.” International Journal of Osteoarchaeology 32(2): 367–77. https://doi.org/10.1002/oa.3071. (Impact Factor: 1.311)

50. Wang, Mengge§, Weian Du§, Renkuan Tang, Yan Liu, Xing Zou, Didi Yuan, Zheng Wang, Jing Liu, Jianxin Guo, Xiaomin Yang, Jing Chen, Meiqing Yang, Xianpeng Zhang, Lan-Hai Wei, Haibin Yuan^, Hui-Yuan Yeh^, Chuan-Chao Wang^, Chao Liu^, and Guanglin He^§. 2022. “Genomic History and Forensic Characteristics of Sherpa Highlanders on the Tibetan Plateau Inferred from High-Resolution InDel Panel and Genome-Wide SNPs.” Forensic Science International: Genetics 56: 102633. https://doi.org/10.1016/j.fsigen.2021.102633. (Impact Factor: 4.882)

49. Wang, Mengge§, Didi Yuan§, Xing Zou, Zheng Wang, Hui-Yuan Yeh, Jing Liu, Lan-Hai Wei, Chuan-Chao Wang^, Bofeng Zhu^, Chao Liu^, and Guanglin He^§. 2021. “Fine-Scale Genetic Structure and Natural Selection Signatures of Southwestern Hans Inferred from Patterns of Genome-Wide Allele, Haplotype and Haplogroup Lineages.” Frontiers in Genetics 12: 727821. https://doi.org/10.3389/fgene.2021.727821.  (Impact Factor: 3.789)

48. He, Guanglin§, Wang Mengge§, Zou Xing§, Chen Pengyu, Wang Zheng, Liu Yan, Yao Hongbin, Wei Lan-Hai, Tang Renkuan, Wang Chuan-Chao, and Yeh Hui-Yuan. 2021. “Peopling History of the Tibetan Plateau and Multiple Waves of Admixture of Tibetans Inferred From Both Ancient and Modern Genome-Wide Data.” Frontiers in Genetics 12: 725243. https://doi.org/10.3389/fgene.2021.725243. (Impact factor: 3.789)

47. Dittmar, Jenna M^., Elizabeth S. Berger, Ruilin Mao, Hui Wang, and Hui-Yuan Yeh. 2021. “The Mogou Bioarchaeology Project: Exploring Health in the Chinese Bronze Age.” Antiquity 95(381): e15. https://doi.org/10.15184/aqy.2021.50. (Impact Factor: 1.613)

46. Yao, Hongbin^§, Mengge Wang§, Xing Zou§, Yingxiang Li§, Xiaomin Yang, Ailin Li, Hui-Yuan Yeh, Peixin Wang, Zheng Wang, Jingya Bai, Jianxin Guo, Jinwen Chen, Xiao Ding, Yan Zhang, Baoquan Lin, Chuan-Chao Wang^, and Guanglin He^. 2021. “New Insights into the Fine-Scale History of Western-Eastern Admixture of the Northwestern Chinese Population in the Hexi Corridor via Genome-Wide Genetic Legacy.” Molecular Genetics and Genomics 296(3):631-51. https://doi.org/10.1007/s00438-021-01767-0. (Impact Factor: 2.797)

45. He, Guanglin§, Jing Liu§, Mengge Wang, Xing Zou, Tianyue Ming, Sumin Zhu, Hui-Yuan Yeh, Chuanchao Wang, Zheng Wang^, and Yiping Hou^. 2021. “Massively Parallel Sequencing of 165 Ancestry-Informative SNPs and Forensic Biogeographical Ancestry Inference in Three Southern Chinese Sinitic/Tai-Kadai Populations.” Forensic Science International: Genetics 52: 102475. https://doi.org/10.1101/2020.12.05.412866. (Impact Factor: 4.884)

44. Wang, Chuan-Chao§^, Hui-Yuan Yeh§, Alexander N. Popov§, Hu-Qin Zhang§, Hirofumi Matsumura, Kendra Sirak, Olivia Cheronet, Alexey Kovalev, Nadin Rohland, Alexander M. Kim, Swapan Mallick, Rebecca Bernardos, Dashtseveg Tumen, Jing Zhao, Yi-Chang Liu, Jiun-Yu Liu, Matthew Mah, Ke Wang, Zhao Zhang, Nicole Adamski, Nasreen Broomandkhoshbacht, Kimberly Callan, Francesca Candilio, Kellie Sara Duffett Carlson, Brendan J. Culleton, Laurie Eccles, Suzanne Freilich, Denise Keating, Ann Marie Lawson, Kirsten Mandl, Megan Michel, Jonas Oppenheimer, Kadir Toykan Özdoğan, Kristin Stewardson, Shaoqing Wen, Shi Yan, Fatma Zalzala, Richard Chuang, Ching-Jung Huang, Hana Looh, Chung-Ching Shiung, Yuri G. Nikitin, Andrei V. Tabarev, Alexey A. Tishkin, Song Lin, Zhou-Yong Sun, Xiao-Ming Wu, Tie-Lin Yang, Xi Hu, Liang Chen, Hua Du, Jamsranjav Bayarsaikhan, Enkhbayar Mijiddorj, Diimaajav Erdenebaatar, Tumur-Ochir Iderkhangai, Erdene Myagmar, Hideaki Kanzawa-Kiriyama, Masato Nishino, Ken-ichi Shinoda, Olga A. Shubina, Jianxin Guo, Wangwei Cai, Qiongying Deng, Longli Kang, Dawei Li, Dongna Li, Rong Lin, Nini, Rukesh Shrestha, Ling-Xiang Wang, Lanhai Wei, Guangmao Xie, Hongbing Yao, Manfei Zhang, Guanglin He, Xiaomin Yang, Rong Hu, Martine Robbeets, Stephan Schiffels, Douglas J. Kennett, Li Jin, Hui Li, Johannes Krause^, Ron Pinhasi^, and David Reich^. 2021. “Genomic Insights into the Formation of Human Populations in East Asia.” Nature  591:413 -19. https://doi.org/10.1038/s41586-021-03336-2.  (Impact Factor: 42.778)

43. He, Guanglin§, Mengge Wang§, Yingxiang Li§, Xing Zou, Hui-Yuan Yeh, Renkuan Tang, Xiaomin Yang, Zheng Wang, Jianxin Guo, Ting Luo, Jing Zhao, Jin Sun, Rong Hu, Lan-Hai Wei, Gang Chen^, Yiping Hou^, and Chuan-Chao Wang^. 2020. “Fine-Scale North-to-South Genetic Admixture Profile in Shaanxi Han Chinese Revealed by Genome-Wide Demographic History Reconstruction.” Journal of Systematics and Evolution 59: 1–20. https://doi.org/10.1111/jse.12715.  (Impact Factor: 4.330)

42. He, Guanglin§, Yingxiang Li§, Mengge Wang§, Xing Zou, Hui-Yuan Yeh, Xiao-Min Yang, Zheng Wang, Ren-Kuan Tang, Su-Min Zhu, Jian-Xin Guo, Ting Luo, Jing Zhao, Jin Sun, Zi-Yang Xia, Hao-Liang Fan, Rong Hu, Lan-Hai Wei, Gang Chen^, Yiping Hou^, and Chuan-Chao Wang^. 2020. “Fine-Scale Genetic Structure of Tujia and Central Han Chinese Revealing Massive Genetic Admixture under Language Borrowing.” Journal of Systematics and Evolution 59: 1–20. https://doi.org/10.1111/jse.12670.  (Impact Factor: 4.330)

41. Zhang, Qun**, and Hui-Yuan Yeh^. 2020. “A Comparative Study on the Tibial Morphology among Several Populations in Ancient East Asia.” Elementa: Science of the Anthropocene 9 (1): 00071. https://doi.org/10.1525/elementa.2021.00071. (Impact factor: 4.212)

40. Zhang, Qun^**, Xiaoyang Wang, Hui-Yuan Yeh, and Quanchao Zhang. 2020. “Paleopathological Study on the Skeleton with Cranial Lesion from the Shiyanzi Cemetery in Ningxia.” Acta Anthropologica Sinica 39(e): 647–59. https://doi.org/10.16359/j.cnki.cn11-1963/q.2020.0050. 

39. Seah, Cheng Ta**, Siao-Wun Lu, Xiaoya Zhan*, and Hui-Yuan Yeh^. 2020. “Parasites in the Ming Dynasty: From the Perspective of the Compendium of Materia Medica (Bencao Gangmu, 1596 CE).” Taiwan Journal of Clinical Chinese Medicine 26 (1): 1–14. https://doi.org/10.6968/TJCCM.202101_26(1).0001.

38. Sua, Jo Nie, Si Yi Lim, Mulyadi Halim Yulius, Xingtong Su, Edward Kien Yee Yapp, Nguyen Quoc Khanh Le^, Hui-Yuan Yeh^, and Matthew Chin Heng Chua^. 2020. “Incorporating Convolutional Neural Networks and Sequence Graph Transform for Identifying Multilabel Protein Lysine PTM Sites.” Chemometrics and Intelligent Laboratory Systems 206: 104171. https://doi.org/10.1016/j.chemolab.2020.104171. (Impact Factor: 2.895)

37. Dittmar, Jenna M.^, Elizabeth S. Berger, Ruilin Mao, Hui Wang, and Hui-Yuan Yeh. 2020. “A Probable Case of Multiple Myeloma from Bronze Age China.” International Journal of Paleopathology 31: 64–70. https://doi.org/10.1016/j.ijpp.2020.10.003. (Impact Factor: 1.614)

36. Le, Nguyen Quoc Khanh**^, Duyen Thi Do, Fang-Ying Chiu, Edward Kien Yee Yapp, Hui-Yuan Yeh, and Cheng-Yu Chen^. 2020. “XGBoost Improves Classification of MGMT Promoter Methylation Status in IDH1 Wildtype Glioblastoma.” Journal of Personalized Medicine 10: 128. https://doi.org/10.3390/jpm10030128.  (Impact Factor: 4.433)

35. Zhou, Yawei, Shuang Lin, Rangping Qin, Hui-Yuan Yeh^, and Qun Zhang^**. 2020. “Winner Takes All: Reconstructing the Decapitation of a Warrior in Bronze Age China from Osteological Evidence.” Archaeological and Anthropological Sciences 12: 1–11. https://doi.org/10.1007/s12520-020-01183-2.  (Impact Factor: 2.063)

34. Sabin, Susanna^, Hui-Yuan Yeh, Aleks Pluskowski, Piers Mitchell, and Kirsten Bos^. 2020. “Estimating Molecular Preservation of the Intestinal Microbiome via Metagenomic Analyses of Latrine Sediments from Two Medieval Cities.” Philosophical Transactions of the Royal Society B 375: 20190576. https://doi.org/10.1098/rstb.2019.0576.  (Impact Factor: 5.680)

33. Shaw, Tarryn§, Sock Hoai Chan§, Jing Xian Teo, Siao Ting Chong, Shao-Tzu Li, Eliza Courtney, Diana Ishak, Haresh Sankar, Zoe Li Ting Ang, Jianbang Chiang, Marie Loh, Li Zhou, Soo Chin Lee, Hui-Yuan Yeh, Arun Mouli Kolinjivadi, Weng Khong Lim, and Joanne Ngeow^. 2020. “Investigation into the Origins of an Ancient BRCA1 Founder Mutation Identified among Chinese Families in Singapore.” International Journal of Cancer 148(3):637-45. https://doi.org/10.1002/ijc.33241. (Impact Factor: 5.07)

32. Zhou, Yawei, Shuang Lin, Wanfa Gu, Letian He^, Qun Zhang**^, and Hui-Yuan Yeh^. 2020. “Early Evidence of Trepanation along the Yellow River Basin in Neolithic China.” Archaeological and Anthropological Sciences 12(8): 176 https://doi.org/10.1007/s12520-020-01151-w.   (Impact Factor: 2.063)

31. Yeh, Hui-Yuan, Chieh-fu Jeff Cheng, ChingJung Huang, Xiaoya Zhan*, Weng Kin Wong**, and Piers D. Mitchell^. 2019. “Discovery of Eurytrema Eggs in Sediment from a Colonial Period Latrine in Taiwan.” The Korean Journal of Parasitology 57 (6): 595–599. https://doi.org/10.3347/kjp.2019.57.6.595. (Impact Factor: 1.82)

30. Zhan, Xiaoya*, Hui-Yuan Yeh, Dong Hoon Shin, Jong-Yil Chai, Min Seo, and Piers D. Mitchell^. 2019. “Differential Change in the Prevalence of the Ascaris, Trichuris, and Clonorchis Infection among Past East Asian Populations.” The Korean Journal of Parasitology 57 (6): 601–05. https://doi.org/10.3347/kjp.2019.57.6.601.  (Impact Factor: 1.82)

29. Le, Nguyen Quoc Khanh**^, Edward Kien Yee Yapp, Nagasundaram Nagarajan**, and Hui-Yuan Yeh^. 2019. “Classifying Promoters by Interpreting the Hidden Information of DNA Sequences via Deep Learning and Combination of Continuous FastText N-Grams.” Frontiers in Bioengineering and Biotechnology 7: 305. https://doi.org/10.3389/fbioe.2019.00305.  (Impact Factor: 4.210)

28. Nagarajan, Nagasundaram**^, Edward Kien Yee Yapp, Nguyen Quoc Khanh Le**, Balu Kamaraj, Al-Subaie Abeer Mohammed, and Yeh Hui-Yuan^. 2019. “Application of Computational Biology and Artificial Intelligence Technologies in Cancer Precision Drug Discovery.” BioMed Research International 2019: 1–15. https://doi.org/10.1155/2019/8427042. (Impact Factor: 2.140)

27. Le, Nguyen Quoc Khanh**, Edward Yapp, Nagasundaram Nagarajan**, Matthew Chin Heng Chua, and Hui Yuan Yeh^. 2019. “Computational Identification of Vesicular Transport Proteins from Sequences Using Deep Gated Recurrent Units Architecture.” Computational and Structural Biotechnology Journal 17: 1245–54. https://doi.org/10.1016/j.csbj.2019.09.005.  (Impact Factor: 5.110)

26. Zhan, Xiaoya*, Ai-Jia Mu, Liang Chen, Qun Zhang**, Yong Wu, Wanglin Hu, and Hui-Yuan Yeh^. 2019. “Differential Diagnosis of the Cranial Perforations on the Early Iron Age along the Ancient Silk Road in Xinjiang, China.” Archaeological and Anthropological Sciences 11: 6829–6839. https://doi.org/10.1007/s12520-019-00942-0  (Impact Factor: 2.12)

25. Zhang, Qun**, Xuezhou Li, Qian Wang, Hui-Yuan Yeh, Hong Zhu, Yanguo Qin^, and Quanchao Zhang^. 2019. “Osteological Evidence of Violence during the Formation of the Chinese Northern Nomadic Cultural Belt in the Bronze Age.” Archaeological and Anthropological Sciences 11 (1): 1–16. https://doi.org/10.1007/s12520-019-00934-0.  (Impact Factor: 2.12)

24.Zhang, Qun**§, Quanchao Zhang**§, Shiyu Yang, Paul C. Dechow, Hong Zhu, Hui-Yuan Yeh^, and Qian Wang^. 2019. “Divided Zygoma in Holocene Human Populations from Northern China.” American Journal of Human Biology 31 (4): e23314. https://doi.org/10.1002/ajhb.23314. (Impact Factor: 1.92)

23. Dittmar, Jenna M., Elizabeth S. Berger, Xiaoya Zhan*, Ruilin Mao, Hui Wang, and Hui-Yuan Yeh^. 2019. “Skeletal Evidence for Violent Trauma from the Bronze Age Qijia Culture (2,300–1,500 BCE), Gansu Province, China.” International Journal of Paleopathology 27: 66–79. https://doi.org/10.1016/j.ijpp.2019.08.002. (Impact factor: 1.299)

22. Tan, Kok Keng§, Nguyen Quoc Khanh Le§, Hui-Yuan Yeh^, and Matthew Chin Heng Chua^. 2019. “Ensemble of Deep Recurrent Neural Networks for Identifying Enhancers via Dinucleotide Physiochemical Properties.” Cells 8 (7): 767. https://doi.org/10.3390/cells8070767. (Impact factor: 5.656)

21. Le, Nguyen Quoc Khanh**^, Edward Kien Yee Yapp, and Hui-Yuan Yeh^. 2019. “ET-GRU: Using Multi-Layer Gated Recurrent Units to Identify Electron Transport Proteins.” BMC Bioinformatics 20 (377) https://doi.org/10.1186/s12859-019-2972-5. (Impact Factor: 2.511)

20. He, Guanglin§, Atif Adnan§, Allah Rakha, Hui-Yuan Yeh, Mengge Wang, Xing Zou, Jianxin Guo, Muhammad Rehman, Abulhasan Fawad, Pengyu Chen^, and Chuan-Chao Wang^. 2019. “A Comprehensive Exploration of the Genetic Legacy and Forensic Features of Afghanistan and Pakistan Mongolian-Descent Hazara.” Forensic Science International: Genetics 42: e1–e12. https://doi.org/10.1016/j.fsigen.2019.05.010. (Impact factor: 4.075)

19. Zhang, Qun**, Peng Liu, Hui-Yuan Yeh, Xingyu Man, Lixin Wang, Hong Zhu, Qian Wang^, and Quanchao Zhang^. 2019. “Intentional Cranial Modification from Houtaomuga Site, Jilin, China – Earliest Evidence and Longest in Situ Practice during the Neolithic Age.” American Journal of Physical Anthropology 169: 747–756. https://doi.org/10.1002/ajpa.23888. (Impact factor: 2.55)

18. Gopalakrishnan, Chandrasekhar, Abeer Mohammed Al-Subaie, Nagasundaram Nagarajan**, Hui-Yuan Yeh, Iftikhar Alam Tayubi, and Balu Kamaraj^. 2019. “Prioritization of SNPs in y+LAT-1 Culpable of Lysinuric Protein Intolerance and Their Mutational Impacts Using Computational Approach.” Journal of Cellular Biochemistry 120: 18496–18508. https://doi.org/10.1002/jcb.29172. (Impact factor: 3.140)

17. Le, Nguyen Quoc Khanh**^, Tuan-Tu Huynh, Edward Kien Yee Yapp, and Hui-Yuan Yeh^. 2019. “Identification of Clathrin Proteins by Incorporating Hyperparameter Optimization in Deep Learning and PSSM Profiles.” Computer Methods and Programs in Biomedicine 177: 81–88. https://doi.org/10.1016/j.cmpb.2019.05.016. (Impact factor: 3.632)

16. Le, Nguyen Quoc Khanh**^, Quang-Thai Ho, Edward Kien Yee Yapp, Yu-Yen Ou^, and Hui-Yuan Yeh^. 2019. “DeepETC: A Deep Convolutional Neural Network Architecture for Investigating and Classifying Electron Transport Chain’s Complexes.” Neurocomputing 375: 71–79. https://doi.org/10.1016/j.neucom.2019.09.070. (Impact factor: 3.317)

15. Nagarajan, Nagasundaram**^, Edward K. Y. Yapp, Nguyen Quoc Khanh Le, and Hui-Yuan Yeh^. 2019. “In Silico Screening of Sugar Alcohol Compounds to Inhibit Viral Matrix Protein VP40 of Ebola Virus.” Molecular Biology Reports 46: 3315–24. https://doi.org/10.1007/s11033-019-04792-w. (Impact factor: 1.889)

14. Le, Nguyen Quoc Khanh**^, Edward Kien Yee Yapp, Yu-Yen Ou, and Hui-Yuan Yeh^. 2019. “iMotor-CNN: Identifying Molecular Functions of Cytoskeleton Motor Proteins Using 2D Convolutional Neural Network via Chou’s 5-Step Rule.” Analytical Biochemistry 575: 17–26. https://doi.org/10.1016/j.ab.2019.03.017. (Impact factor: 2.219) 

13. Le, Khanh Nguyen**^, Edward Kien Yee Yapp, Quang-Thai Ho, Nagarajan Nagasundaram**, Yu-Yen Ou, and Hui-Yuan Yeh^. 2019. “iEnhancer-5Step: Identifying Enhancers Using Hidden Information of DNA Sequences via Chou’s 5-Step-Rule and Word Embedding.” Analytical Biochemistry 571: 53–61. https://doi.org/10.1016/j.ab.2019.02.017. (Impact factor: 2.219)

12. Yeh, Hui-Yuan^, Xiaoya Zhan*, and Wuyun Qi. 2019. “A Comparison of Ancient Parasites as Seen from Archaeological Contexts and Early Medical Texts in China.” International Journal of Paleopathology 25: 30–38. https://doi.org/10.1016/j.ijpp.2019.03.004. (Impact factor: 1.614)

11. Dittmar, Jenna M.^, Xiaoya Zhan*, Elizabeth Berger, Ruilin Mao, Hui Wang, Yongsheng Zhao, and Hui-Yuan Yeh. 2019. “Ritualistic Cranial Surgery in the Bronze Age Qijia Culture (2100–1400 BCE), Gansu, China.” Acta Anthropologica Sinica 38(3): 389‑97.

https://doi.org/10.16359/j.cnki.cn11-1963/q.2019.0035.

10. Huang, Xiufeng^§, Qinghui Zhou§, Xiaoyun Bin, Shu Lai, Chaowen Lin, Rong Hu, Jiashun Xiao, Dajun Luo, Yingxiang Li, Lan-Hai Wei, Hui-Yuan Yeh, Gang Chen, and Chuan-Chao Wang^. 2018. “The Genetic Assimilation in Language Borrowing Inferred from Jing People.” American Journal of Physical Anthropology 166: 638–48. https://doi.org/10.1002/ajpa.23449. (Impact factor: 2.55)

9. Williams, Faith S., Theo Arnold-Foster, Hui-Yuan Yeh, Marissa L. Ledger, Jan Baeten, Jeroen Poblome, and Piers D. Mitchell^. 2017. “Intestinal Parasites from the 2nd–5th Century AD Latrine in the Roman Baths at Sagalassos (Turkey).” International Journal of Paleopathology 19: 37–42. https://doi.org/10.1016/j.ijpp.2017.09.002. (Impact factor: 1.0)

8. Yao, Hong-Bing, Senwei Tang, Xiaotian Yao, Hui-Yuan Yeh, Wanhu Zhang, Zhiyan Xie, Qiajun Du, Liying Ma, Shuoyun Wei, Xue Gong, Zilong Zhang, Quanfang Li, Bingying Xu, Hu-Qin Zhang, Gang Chen, and Chuan-Chao Wang^. 2017. “The Genetic Admixture in Tibetan-Yi Corridor.” American Journal of Physical Anthropology 164 (3): 522–32 https://doi.org/10.1002/ajpa.23291. (Impact factor: 2.55)

7. Wang, Chuan-Chao^, Lei Shang, Hui-Yuan Yeh, and Lan-Hai Wei. 2016. “The Consistencies of Y Chromosomal and Autosomal Continental Ancestry Vary Among Haplogroups.” Journal of Forensic Science and Medicine 2(4): 229–32. https://doi.org/10.4103/2349-5014.197925. (Impact factor: 0.3)

6. Yeh, Hui-Yuan, and Piers D. Mitchell^. 2016. “Ancient Human Parasites in Ethnic Chinese Populations.” The Korean Journal of Parasitology 54(5): 565–72. https://doi.org/10.3347/kjp.2016.54.5.565. (Impact factor: 1.82)

5. Yeh, Hui-Yuan, Yu-Pei Chen, and Piers D. Mitchell^. 2016. “Human Intestinal Parasites from the Wushantou Site in Neolithic Period Taiwan (800–1 BC).” The Journal of Island and Coastal Archaeology 11(3): 425–34. https://doi.org/10.1080/15564894.2016.1218394. (Impact factor: 1.96)

4. Yeh, Hui-Yuan, Ruilin Mao, Hui Wang, Wuyun Qi, and Piers D. Mitchell^. 2016. “Early Evidence for Travel with Infectious Diseases along the Silk Road: Intestinal Parasites from 2,000-Year-Old Personal Hygiene Sticks in a Latrine at Xuanquanzhi Relay Station in China.” Journal of Archaeological Science: Reports 9: 758–64. https://doi.org/10.1016/j.jasrep.2016.05.010. (Impact factor: 1.75)

3. Yeh, Hui-Yuan, Kay Prag, Christa Clamer, Jean-Baptiste Humbert, and Piers D. Mitchell^. 2015. “Human Intestinal Parasites from a Mamluk Period Cesspool in the Christian Quarter of Jerusalem: Potential Indicators of Long Distance Travel in the 15th Century AD.” International Journal of Paleopathology 9: 69–75. https://doi.org/10.1016/j.ijpp.2015.02.003. (Impact factor: 1.0)

2. Yeh, Hui-Yuan, Aleks Pluskowski, Uldis Kalējs, and Piers D. Mitchell^. 2014. “Intestinal Parasites in a Mid-14th Century Latrine from Riga, Latvia: Fish Tapeworm and the Consumption of Uncooked Fish in the Medieval Eastern Baltic Region.” Journal of Archaeological Science 49: 83–89. https://doi.org/10.1016/j.jas.2014.05.001. (Impact factor: 2.20)

1. Mitchell, Piers D. ^, Hui-Yuan Yeh, Jo Appleby, and Richard Buckley. 2013. “The Intestinal Parasites of King Richard III.” The Lancet 382: 888. https://doi.org/10.1016/S0140-6736(13)61757-2. (Impact factor: 45.22)

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Book Chapters:

• Dittmar, Jenna M^., Elizabeth S. Berger, Ruilin Mao, Hui Wang, and Hui-Yuan Yeh. “Performative Violence and Power: Human Sacrifice as a Mechanism to Establish Group Identity and Social Organization in Early Bronze Age China.” In The Poetics of Violence in Afroeurasian Bioarchaeology, edited by R. A. Campbell and A. J. Osterholtz. Bioarchaeology and Social Theory. Cham: Springer, 2024. https://doi.org/10.1007/978-3-031-49719-3_2.

• Mitchell, P. D.^, and Hui-Yuan Yeh. “Intestinal Parasites at the Xuanquanzhi Relay Station on the Silk Road 2,000 Years Ago.” In Infectious Diseases Along the Silk Roads, edited by H. Melhorn, X. Wu, and Z. Wu. Springer, Cham, 2023. https://doi.org/10.1007/978-3-031-35275-1_9.

• Zhan, Xiaoya*, Wuyun Qi, and Hui-Yuan Yeh^. “Ancient Parasites Seen in the Archaeology and Medical Contexts in the Han Dynasty, China.” In The Handbook of Mummy Studies: New Frontiers in Scientific and Cultural Perspectives, edited by Dong Hoon Shin and Raffaella Bianucci. Springer Nature, 2020.

• Yeh, Hui-Yuan, and Piers D. Mitchell^. “Parasites and Baltic Crusading in Medieval Riga: Insights into Disease, Diet and Hygiene.” In Terra Sacra: The Ecology of Crusading, Colonisation and Religious Conversion in the Medieval Eastern Baltic, edited by Aleksander Pluskowski. Turnhout: Brepols, 2019.

• Yeh, Hui-Yuan, and Piers D. Mitchell^. “Intestinal Parasites in the Cesspool.” In Colegio Epillar: Excavations in Jerusalem, Christian Quarter, edited by C. Clamer, K. Prag, and J.-B. Humbert. Cahiers de la Revue Biblique, vol. 88. Leuven: Peeters, 2017.

Other Scholarly Articles:

• Liu, Jiun-Yu, Hui-Yuan Yeh^, Yi-Chang Liu, Li-Ying Wang, and Xinyi Liu. “A Preliminary Result of the Carbon and Nitrogen Stable Isotope Analysis of the Hanben Site.” In Proceedings of 2015 Annual Conference of Taiwan Archaeologists, edited by National Museum of Prehistory. Taitung, Taiwan: National Museum of Prehistory, 2016.
• Yeh, Hui-Yuan^. 2010. “臺灣體質人類學研究的發展與回顧 (Development and review of physical anthropology in Taiwan).” 人類與文化 (Man and Culture) 41: 97-102. http://issuu.com/rubyhsieh/docs/07physical

• Yeh, Hui-Yuan^. “從體質形態學研究探討台南石橋遺址蔦松文化之社會性別分工 (An Osteomorphometric Perspective on Sexual Division of Labour of the Nia-sung Culture in the Shih-Chiao Site, Tainan County).” In Proceedings of the Conference and Workshop of Sitting and Chatting on Peinan Site: A Cross-Border Thinking and Integration of Fields, edited by National Museum of Prehistory. Taitung, Taiwan: National Museum of Prehistory, 2010.
• Yeh, Hui-Yuan^. “嶺頂第2地點出土人骨說明 (An explanation for human remains in No.2 location of Lingding Site).” In Final Report of Investigation and Research of Lingding Dakeng Site, edited by Yu-Pei Chen. Hualien County, Taiwan: Cultural Affairs Bureau, 2009.

• Yeh, Hui-Yuan^. “人骨 (Human remains).” In Final Report of Arrangement and Research Project of Jar Burial in Shih-Chiao Site at Nanke Special Area, edited by Yu-Pei Chen. Taitung, Taiwan: National Museum of Prehistory, 2009.